Saccharopolyspora soli sp. nov., isolated from Northern Cyprus soil

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dc.authoridCetin, Demet/0000-0003-1186-4229
dc.authoridSaygin, Hayrettin/0000-0002-8642-5872
dc.authoridVeyisoglu, Aysel/0000-0002-1406-5513
dc.authoridGUVEN, KIYMET/0000-0001-6683-0419
dc.contributor.authorVeyisoglu, Aysel
dc.contributor.authorTatar, Demet
dc.contributor.authorSaygin, Hayrettin
dc.contributor.authorCetin, Demet
dc.contributor.authorGuven, Kiymet
dc.contributor.authorSahin, Nevzat
dc.date.accessioned2025-03-23T19:44:39Z
dc.date.available2025-03-23T19:44:39Z
dc.date.issued2022
dc.departmentSinop Üniversitesi
dc.description.abstractA novel Gram-stain positive, aerobic, non-motile actinobacterium, designated strain K220(T), was isolated from soil collected from Cape Andreas (Zafer Burnu), Northern Cyprus, and subjected to a polyphasic taxonomic approach. The organism was shown to have phylogenetic, chemotaxonomic, cultural and morphological properties consistent with its classification in the genus Saccharopolyspora. 16S rRNA gene sequence analysis of strain K220(T) showed that it is closely related to the type strains of Saccharopolyspora maritima 3SS5-12 (T), Saccharopolyspora kobensis JCM 9109 (T) and Saccharopolyspora hirsuta ATCC 27875 (T) with 97.6, 97.5 and 97.0% sequence similarity, respectively. In silico DNA-DNA hybridization and average nucleotide identity values between strain K220(T) and type strains of the genus Saccharopolyspora with publicly available genomes were 22.1-31.2% and 76.0-83.16%, respectively. The DNA G + C content of strain K220(T) was 68.3 mol%. The genome of strain K220(T) has genes associated with 24 biosynthetic gene clusters. The strain contained MK-9(H-4) and iso-C-16: 0 as the predominant respiratory quinone and fatty acid, respectively. The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine. Based on evidence collected from the genotypic, phenotypic and phylogenetic analyses, strain K220(T) is considered to represent a novel species in the genus Saccharopolyspora, for which the name Saccharopolyspora soli sp. nov. is proposed. The type strain is K220(T) (= JCM 33912(T) = KCTC 49395(T)).
dc.identifier.doi10.1007/s00203-022-02994-8
dc.identifier.issn0302-8933
dc.identifier.issn1432-072X
dc.identifier.issue7
dc.identifier.pmid35670849
dc.identifier.scopus2-s2.0-85131772083
dc.identifier.scopusqualityQ3
dc.identifier.urihttps://doi.org/10.1007/s00203-022-02994-8
dc.identifier.urihttps://hdl.handle.net/11486/6991
dc.identifier.volume204
dc.identifier.wosWOS:000807505100003
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofArchives of Microbiology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20250323
dc.subjectSaccharopolyspora
dc.subjectBiosynthetic gene clusters
dc.subjectPolyphasic taxonomy
dc.subject16S rRNA gene
dc.subjectGenome analyses
dc.titleSaccharopolyspora soli sp. nov., isolated from Northern Cyprus soil
dc.typeArticle

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