Micromonospora profundi sp nov., isolated from deep marine sediment

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dc.authoridCetin, Demet/0000-0003-1186-4229
dc.authoridVeyisoglu, Aysel/0000-0002-1406-5513
dc.authoridCarro, Lorena/0000-0001-8833-642X
dc.authoridSahin, Nevzat/0000-0002-6026-656X
dc.contributor.authorVeyisoglu, Aysel
dc.contributor.authorCarro, Lorena
dc.contributor.authorCetin, Demet
dc.contributor.authorGuven, Kiymet
dc.contributor.authorSproeer, Cathrin
dc.contributor.authorPoetter, Gabriele
dc.contributor.authorKlenk, Hans-Peter
dc.date.accessioned2025-03-23T19:34:16Z
dc.date.available2025-03-23T19:34:16Z
dc.date.issued2016
dc.departmentSinop Üniversitesi
dc.description.abstractA novel actinobacterial strain, designated DS3010(T), was isolated from a Black Sea marine sediment and characterized using a polyphasic approach. The strain was shown to have chemotaxonomic, morphological and phylogenetic properties consistent with classification as representing a member of the genus Micromonospora. Comparative 16S rRNA gene sequence studies showed that the strain was most closely related to the type strains of Micromonospora saelicesensis (99.5 %), Micromonospora chokoriensis (99.4 %) and Micromonospora violae (99.3 %). Similarly, a corresponding analysis based on partial gyrB gene sequences showed that it formed a distinct phyletic branch in a subclade that included the type strains of Micromonosporazamorensis, 'Micromonospora zeae', 'Micromonospora jinlongensis', M. saelicesensis and Micromonospora lupini. DS3010(T) was distinguished from its closest phylogenetic neighbours by low levels of DNA-DNA relatedness and by a combination of chemotaxonomic and phenotypic properties. On the basis of these data, it is proposed that the isolate should be assigned to the genus Micromonospora as Micromonospora profundi sp. nov. with isolate DS3010(T) (=DSM 45981(T) =KCTC 29243(T)) as the type strain.
dc.description.sponsorshipOndokuz Mayis University [PYO. FEN. 1901.12.014]; Newcastle University
dc.description.sponsorshipThis project was supported by Ondokuz Mayis University (project PYO. FEN. 1901.12.014) and by a postdoctoral fellowship awarded to L. C. by Newcastle University.
dc.identifier.doi10.1099/ijsem.0.001419
dc.identifier.endpage4743
dc.identifier.issn1466-5026
dc.identifier.issn1466-5034
dc.identifier.pmid27515497
dc.identifier.scopus2-s2.0-85005983438
dc.identifier.scopusqualityQ1
dc.identifier.startpage4735
dc.identifier.urihttps://doi.org/10.1099/ijsem.0.001419
dc.identifier.urihttps://hdl.handle.net/11486/5638
dc.identifier.volume66
dc.identifier.wosWOS:000390686600067
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherMicrobiology Soc
dc.relation.ispartofInternational Journal of Systematic and Evolutionary Microbiology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_WOS_20250323
dc.subjectRoot-Nodules
dc.subjectRapid Method
dc.subjectActinomycete
dc.subjectRhizosphere
dc.subjectMenaquinones
dc.subjectExtraction
dc.subjectAcid
dc.subjectSoil
dc.titleMicromonospora profundi sp nov., isolated from deep marine sediment
dc.typeArticle

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