A study of three bacteria isolated from marine sediment and description of Micromonospora globispora sp. nov.

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dc.authoridCarro, Lorena/0000-0001-8833-642X
dc.authoridVeyisoglu, Aysel/0000-0002-1406-5513
dc.authoridCetin, Demet/0000-0003-1186-4229
dc.authoridIgual, Jose M./0000-0002-5080-0378
dc.authoridSahin, Nevzat/0000-0002-6026-656X
dc.contributor.authorCarro, Lorena
dc.contributor.authorVeyisoglu, Aysel
dc.contributor.authorCetin, Demet
dc.contributor.authorIgual, Jose M.
dc.contributor.authorKlenk, Hans-Peter
dc.contributor.authorTrujillo, Martha E.
dc.contributor.authorSahin, Nevzat
dc.date.accessioned2025-03-23T19:37:48Z
dc.date.available2025-03-23T19:37:48Z
dc.date.issued2019
dc.departmentSinop Üniversitesi
dc.description.abstractDuring a study looking for the isolation of new actinobacteria strains with potential for antibiotic production from deep marine sediment, three strains were collected with a morphology similar to the one described for the Micromonospora genus. A polyphasic study was designed to determine the taxonomic affiliation of the strains S2901(T), S2903, and S2904. All the strains showed chemotaxonomic properties in line with their classification in the genus Micromonospora, meso-diaminopimelic acid in the wall peptidoglycan, a tetrahydrogenated menaquinone with nine isoprene units as major respiratory quinone, iso-C-15:0 and iso-C-16:0 as major fatty acids and diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol as major polar lipids. The 16S rRNA gene sequences of strain S2901(T), S2903, and S2904 showed the highest similarity (99.2%) with the type strain of Micromonospora halophytica DSM 43171(T), forming an independent branch in the phylogenetic gene tree. Their independent position was confirmed with gyrB gene and MLSA phylogenies. Whole genome sequences confirmed by digital DNA-DNA hybridization analysis that the isolates should be assigned to a new species within the genus Micromonospora for which the name Micromonospora globispora sp. nov. (S2901(T), S2903 and S2904) is proposed. (C) 2018 Elsevier GmbH. All rights reserved.
dc.description.sponsorshipOndokuz Mayis University [PYO. FEN. 1901.12.014]; School of Biology (Newcastle University); BBSRC [BB/L024209/1]; Newcastle University; Salamanca University; BBSRC [BB/L024209/1] Funding Source: UKRI
dc.description.sponsorshipThis project was supported by Ondokuz Mayis University (project PYO. FEN. 1901.12.014) and the School of Biology (Newcastle University). Genome sequencing was provided by MicrobesNG (http://www.microbesng.uk), which is supported by the BBSRC (grant number BB/L024209/1). LC is grateful to Newcastle University and Salamanca University for postdoctoral fellowships.
dc.identifier.doi10.1016/j.syapm.2018.11.003
dc.identifier.endpage197
dc.identifier.issn0723-2020
dc.identifier.issue2
dc.identifier.pmid30528275
dc.identifier.scopus2-s2.0-85057833927
dc.identifier.scopusqualityQ1
dc.identifier.startpage190
dc.identifier.urihttps://doi.org/10.1016/j.syapm.2018.11.003
dc.identifier.urihttps://hdl.handle.net/11486/6015
dc.identifier.volume42
dc.identifier.wosWOS:000460152500009
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherElsevier Gmbh
dc.relation.ispartofSystematic and Applied Microbiology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_WOS_20250323
dc.subjectMicromonospora
dc.subjectPolyphasic taxonomy
dc.subjectMarine sediment
dc.subjectMLSA
dc.titleA study of three bacteria isolated from marine sediment and description of Micromonospora globispora sp. nov.
dc.typeArticle

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